国际麻醉学与复苏杂志   2024, Issue (11): 0-0
    
转录组联合蛋白质组测序探索与急性呼吸窘迫综合征肺组织病理变化相关的血清生物标志物
龚睿, 王乐, 龙刚宇, 汪茜, 姚尚龙, 尚游, 张定宇1()
1.华中科技大学同济医学院附属协和医院重症医学科
Exploring Serum Biomarkers Associated with Lung Tissue Pathological Changes through Transcriptomics and Proteomics Sequencing in Acute Respiratory Distress Syndrome
 全文:
摘要:

目的 探索与肺源性急性呼吸窘迫综合征(P-ARDS)肺组织病理蛋白变化一致的血清蛋白标志物。方法 SPF级的健康C57BL/6小鼠利用随机数字表法分为2组:对照组和ARDS实验组。ARDS实验组给予内毒素(LPS)气道滴注,对照组小鼠经气道注射等体积的生理盐水。模型构建后24小时,两组小鼠麻醉后处死,两组小鼠的肺组织进行苏木精-伊红(HE)染色和湿干重比(W/D)检测评估ARDS疾病模型;另外对对照组和ARDS组小鼠肺组织分别进行转录组和蛋白质组测序,并对两组小鼠的血清进行蛋白质组测序,然后将上述测序数据与本课题组前期新型冠状病毒肺炎(COVID-19)诱导的ARDS患者的血清和肺组织蛋白质组学的数据进行联合分析,筛选与肺组织病理蛋白变化一致的血清蛋白标志物。结果 与对照组相比,ARDS实验组小鼠肺组织病理损伤评分和肺湿干重比均显著升高(P0.05),表明ARDS小鼠疾病模型构建成功。通过对小鼠肺组织转录、蛋白测序,以及血清蛋白测序,共鉴定出28个共同的差异蛋白在ARDS小鼠肺组织及血清中变化趋势一致,进一步结合ARDS患者肺组织与血浆蛋白测序结果,筛选出四个候选蛋白,结合珠蛋白(HP)、蛋白S100A9(S100A9)、血清淀粉样蛋白A1(SAA1)、血清淀粉样蛋白A2(SAA2)与ARDS患者病情严重程度呈正相关。结论 四个候选蛋白,包括HP、S100A9、SAA1和SAA2有潜力成为能反映ARDS肺组织病理变化的血清生物标志物,可能具有良好的临床价值。

关键词: 急性呼吸窘迫综合征;生物标志物;转录组学;蛋白质组学
Abstract:

Objective To explore serum protein biomarkers that are consistent with the pathological protein changes in the lungs of patients with pulmonary acute respiratory distress syndrome (P-ARDS). Method Healthy C57BL/6 mice of SPF grade were randomly divided into two groups using the random number table method: a control group and an ARDS experimental group. The ARDS experimental group received intratracheal injection of lipopolysaccharide (LPS), while the control group was administered an equal volume of saline via the same route. The models were established, and 24 hours later, both groups of mice were euthanized after anesthesia. Lung tissues from both groups were subjected to hematoxylin-eosin (HE) staining and wet-to-dry weight ratio (W/D) assessment to evaluate the ARDS disease model. Additionally, transcriptomics and proteomics sequencing were conducted on lung tissues from both the control and ARDS groups, and serum proteome sequencing was performed. These sequencing data were then jointly analyzed with the proteomic data of serum and lung tissue from patients with COVID-19-induced ARDS previously studied by our research group to identify serum protein biomarkers consistent with the pathological protein changes in the lung tissue. Results Compared to the control group, the pathological damage scores and lung wet-to-dry weight ratios in the ARDS experimental group mice were both significantly elevated (P0.05), indicating the successful establishment of the ARDS mouse disease model. A total of 28 differentially expressed proteins were identified that showed a consistent trend of change in both the lung tissue and serum of ARDS mice. Further integration with the proteomic sequencing results of lung tissue and plasma from ARDS patients led to the selection of four candidate proteins: haptoglobin (HP), S100 calcium-binding protein A9 (S100A9), serum amyloid A1 (SAA1), and serum amyloid A2 (SAA2), which were positively correlated with the severity of ARDS in patients. Conclusion The four candidate proteins, including HP, S100A9, SAA1, and SAA2, have the potential to serve as serum biomarkers reflecting the pathological changes in the lung tissue of ARDS patients and may have significant clinical value.

Key words: Acute respiratory distress syndrome; Biomarkers; Transcriptomics; Proteomics